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Texas
The University of Michigan has the most with 11 national championships the last in 1997. GO BLUE
1965-1967.
2002-2007.
they haven't won any.
Nebraska Cornhuskers
The Miami Hurricanes have 5 national championships in football the last being in 2001.
The University of Michigan is the most winningest football program in the history of the NCAA.
The Colorado Buffaloes have won two championships in the last ten years. Both championships won were the Big 12 North Division Championships in the years 2004 and 2005.
Technically, they never have, but from 1960 to 1963, they won 3 in a row, and then tied in 1963.
Navy last won in 1929
once