Two schools have won NCAA national championships in football, baseball, and men's basketball: Jacksonville State University (NCAA Division II) Men's Basketball (1985) Baseball (1990, 1991) Football (1992) University of Wisconsin-Whitewater (NCAA Division III) Men's Basketball (1984, 1989) Baseball (2005) Football (2007, 2009, 2010) Note 1: The NCAA does not officially sanction a football national championship in FBS / Division I Note 2: Jacksonville State now competes at FCS / Division I
Florida in 2006 is it. Michigan State University 1950 and 60's in football. '79 and '00 for basketball.
Yale University is the school with the most national championships in football. The school with the most wins in NCAA Division I football is the University of Michigan.
Im pretty sure there are quite a few but off the top of my head The University of Texas
Larry Kehres, of Mount Union College, Division III, with 9 national championships.
University of Kentucky
John Wooden - (10)
The Bulldogs have won two consensus NCAA Division 1-A college football National Championships and 12 Southeastern Conference championships.