This is the University of Michigan Wolverines who lead in All time wins, All time winning percentage, and most National Titles(11).
They are 8th in all-time wins. Michigan is 1st.
All-Time College Basketball Team With Most Wins up til 08-09 season* University of Kentucky with a record of 1988 wins and 635 lossesAll-Time College Football Team With Most Wins 1869-2008* Michigan with a record of 872-295-36
The college football team that had the most wins during the 1990's was, Florida State.
The University of Michigan Wolverines have the most wins of any college football program in the country.