The Texas Longhorns have the won three NCAA Football Championships: 1963, 1969, and 2005
The University of Texas
The University of Alabama have won the most football national championships with 13
They have won 5 national championships
39 out of their 47 won national championships are NCAA championship wins.
The University of Oklahoma has won 7 undisputed NCAA Football Championships.
Yale University is the school with the most national championships in football. The school with the most wins in NCAA Division I football is the University of Michigan.